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Newfound bacterium casts life in a new light

A Mono Lake bacterium's ability to subsist on deadly arsenic has scientists wide-eyed and rethinking the basics.

December 02, 2010|By Eryn Brown and Thomas H. Maugh II, Los Angeles Times

After days of rampant speculation that NASA was on the cusp of revealing it had detected extraterrestrial life, the reality was slightly more down-to-Earth.

A team of scientists revealed Thursday that they had found a remarkable quality in a bacterium growing quietly in California's Mono Lake — it is the only known life form able to subsist on the deadly element arsenic. The organism even uses arsenic to build the backbone of its DNA.

To researchers searching for life elsewhere in the universe, the discovery still qualified as a heaven-sent event.

"I find this result delightful," said Pamela Conrad, an astrobiologist at NASA's Goddard Space Flight Center in Greenbelt, Md., who wasn't involved in the research. "It makes me expand my notion of what" life in the universe would need to sustain itself.

The organism's existence suggests life on Earth has an unappreciated flexibility, experts said, and could have evolved from a wider array of building blocks than previously thought — not only here, but elsewhere in the universe.

Perhaps no one was more surprised by the revelation than Felisa Wolfe-Simon, the biochemist who identified the creature.

"The mere fact that an organism can grow with this much arsenic, that's outrageous," said Wolfe-Simon, a NASA research fellow based at the U.S. Geological Survey in Menlo Park, Calif.

Previously, all life on Earth was known to rely on six principal elements — carbon, hydrogen, nitrogen, oxygen, sulfur and phosphorus. Phosphorus is a key ingredient in the ladder of DNA, as well as many key components of cellular machinery.

Wolfe-Simon had theorized that arsenic might be able to stand in for phosphorus because it is located directly below phosphorus on the periodic table of elements and behaves similarly. In fact, arsenic's likeness to phosphorus is what makes it toxic to most life: It fools cells into thinking they have the phosphorus they need to survive.

To look for a creature that might bear out her hypothesis, Wolfe-Simon led an expedition to Mono Lake, an arsenic-rich body of water near Yosemite National Park.

The team collected mud from the lake last year and introduced it into an artificial broth designed to mimic the qualities of the natural lake water.

But there was one major difference: In the broth, high levels of arsenic were added in lieu of phosphorus.

The scientists let the mud sit in the broth for several days, then introduced a small portion of it into a fresh batch of the arsenic-laced broth. They repeated the process seven times over a three-month period, and checked to see if anything grew.

They isolated a microbe that survived in what should have been a toxic stew.

"That wasn't supposed to work," Wolfe-Simon said.

Wolfe-Simon said the organism, known as GFAJ-1, is in many respects "unexciting." It breathes oxygen and is a genetic "distant cousin" to the gut bacterium E. coli.

What was remarkable, she said, was its apparent ability to use arsenic to grow. Through laboratory analysis, the team confirmed that both arsenic and phosphorus were present in the cultured organism, but that there wasn't enough phosphorus to sustain the organism on its own.

They also demonstrated that arsenic existed "everywhere" in the cells and that the arsenic appeared to be filling the role of phosphorus, Wolfe-Simon said.

Researchers said the finding, published online Thursday in the journal Science, had forced them to reconsider what they ought to be looking for as they hunt for signs of life beyond Earth.

"This opens our eyes that more things are possible — that life can do more things than we thought," said Bruce Runnegar, a professor of Earth and space sciences at UCLA and a former director of NASA's Astrobiology Institute who wasn't involved in the study.

That was the point NASA wanted to make when it announced Monday that it would hold a news conference later in the week about "an astrobiology finding that will impact the search for evidence of extraterrestrial life."

Those words were enough to fuel rumors that the space agency was preparing to make an announcement of cosmic proportions.

Blogger Jason Kottke examined the list of news conference participants, put 2 and 2 together, and came up with 5. "Has NASA discovered extraterrestrial life?" he wrote on kottke.org. His conclusion: Researchers would most likely announce that they had found evidence of bacteria using arsenic for photosynthesis on Titan, one of Saturn's moons.

Max Read of Gawker then chimed in. "It could be that NASA has been contacted by a warlike race of space aliens," he wrote Tuesday, later acknowledging in an interview that the post had "a certain tongue-in-cheek element."

By Thursday morning, BookMaker.com was offering odds on what NASA had found, including such possibilities as discovery of a life form on Mars, an image of an alien spacecraft and a confession that Area 51 was indeed used for alien studies.

"I don't know about aliens," said Wolfe-Simon, who found the hubbub irritating.

"All I can say is the real stuff is cool."

eryn.brown@latimes.com

thomas.maugh

@latimes.com

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